Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| grea/greb family elongation factor | Verru16B_RS08155 | Not Available | Negative | 1968139 - 1968573 | 15275.4 |
| hypothetical protein | Verru16B_RS08160 | Not Available | Negative | 1968691 - 1969041 | 12260.0 |
| beta-galactosidase gala | Verru16B_RS08165 | Not Available | Negative | 1969536 - 1972313 | 101113.0 |
| gfo/idh/moca family protein | Verru16B_RS08170 | Not Available | Positive | 1972533 - 1973624 | 39595.6 |
| ig-like domain-containing protein | Verru16B_RS08175 | Not Available | Positive | 1973725 - 1975599 | 68741.9 |
| alpha-l-fucosidase | Verru16B_RS08180 | Not Available | Positive | 1975735 - 1978074 | 86805.6 |
| rna-binding protein | Verru16B_RS08185 | Not Available | Negative | 1978322 - 1978681 | 12450.0 |
| tonb-dependent receptor | Verru16B_RS08190 | Not Available | Negative | 1978978 - 1981380 | 88063.9 |
| response regulator transcription factor | Verru16B_RS08195 | Not Available | Positive | 1981624 - 1982337 | 26566.2 |
| hamp domain-containing sensor histidine kinase | Verru16B_RS08200 | Not Available | Positive | 1982330 - 1983673 | 49466.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
