Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | Verru16B_RS08055 | Not Available | Negative | 1944512 - 1945096 | 21129.5 |
| sam-dependent methyltransferase | Verru16B_RS08060 | Not Available | Positive | 1945173 - 1946168 | 36262.5 |
| recombinase | Verru16B_RS08065 | Not Available | Positive | 1946431 - 1948509 | 76030.0 |
| rna methyltransferase | Verru16B_RS08070 | Not Available | Positive | 1948566 - 1949339 | 27861.0 |
| trans-aconitate 2-methyltransferase | Verru16B_RS08075 | Not Available | Negative | 1949449 - 1950318 | 33127.8 |
| fad-binding oxidoreductase | Verru16B_RS08080 | Not Available | Positive | 1950410 - 1951546 | 40309.1 |
| 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase | Verru16B_RS08085 | Not Available | Positive | 1951885 - 1952940 | 37782.7 |
| prephenate dehydratase | Verru16B_RS08090 | Not Available | Positive | 1952937 - 1954013 | 39634.0 |
| nidogen-like domain-containing protein | Verru16B_RS08095 | Not Available | Negative | 1954103 - 1954903 | 27318.8 |
| glycogen synthase glga | Verru16B_RS08100 | Not Available | Positive | 1955080 - 1956543 | 53227.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
