Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase family protein | Verru16B_RS07855 | Not Available | Positive | 1895041 - 1895676 | 22464.2 |
| thiamine pyrophosphate-dependent enzyme | Verru16B_RS07860 | Not Available | Positive | 1895739 - 1898867 | 111962.0 |
| gfo/idh/moca family protein | Verru16B_RS07865 | Not Available | Positive | 1898923 - 1900041 | 39887.9 |
| pep-cterm sorting domain-containing protein | Verru16B_RS07870 | Not Available | Negative | 1900124 - 1900909 | 27111.5 |
| pep-cterm sorting domain-containing protein | Verru16B_RS07875 | Not Available | Negative | 1901085 - 1901918 | 29112.8 |
| asparagine--trna ligase | Verru16B_RS07880 | Not Available | Negative | 1902027 - 1903424 | 52524.8 |
| m14 family metallopeptidase | Verru16B_RS07885 | Not Available | Negative | 1903574 - 1905400 | 66651.5 |
| cupin domain-containing protein | Verru16B_RS07890 | Not Available | Positive | 1905533 - 1906360 | 29871.6 |
| duf1080 domain-containing protein | Verru16B_RS07895 | Not Available | Positive | 1906506 - 1907279 | 27826.8 |
| subclass b3 metallo-beta-lactamase | Verru16B_RS07900 | Not Available | Positive | 1907363 - 1908286 | 32453.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
