Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yhby family rna-binding protein | Verru16B_RS07805 | Not Available | Negative | 1882053 - 1882349 | 10393.6 |
| pseudouridine synthase | Verru16B_RS07810 | Not Available | Negative | 1882411 - 1883109 | 25614.9 |
| alpha/beta hydrolase | Verru16B_RS07815 | Not Available | Positive | 1883219 - 1884319 | 39937.9 |
| smp-30/gluconolactonase/lre family protein | Verru16B_RS07820 | Not Available | Negative | 1884415 - 1885449 | 36903.7 |
| padr family transcriptional regulator | Verru16B_RS07825 | Not Available | Positive | 1885585 - 1885914 | 12499.2 |
| abc transporter permease | Verru16B_RS07830 | Not Available | Positive | 1885938 - 1888580 | 93496.7 |
| tonb-dependent receptor | Verru16B_RS07835 | Not Available | Negative | 1888611 - 1890710 | 74398.5 |
| hypothetical protein | Verru16B_RS07840 | Not Available | Positive | 1890823 - 1892481 | 59803.0 |
| gh3 auxin-responsive promoter family protein | Verru16B_RS07845 | Not Available | Negative | 1892510 - 1894096 | 56996.0 |
| rlua family pseudouridine synthase | Verru16B_RS07850 | Not Available | Positive | 1894237 - 1894980 | 27220.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
