Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4861 domain-containing protein | Verru16B_RS07655 | Not Available | Positive | 1836850 - 1838073 | 43845.2 |
| glycoside hydrolase family 105 protein | Verru16B_RS07660 | Not Available | Positive | 1838073 - 1839164 | 41166.4 |
| glycoside hydrolase family 88 protein | Verru16B_RS18665 | Not Available | Positive | 1839196 - 1841844 | 96968.2 |
| mfs transporter | Verru16B_RS07670 | Not Available | Positive | 1841872 - 1843278 | 51515.5 |
| pectate lyase | Verru16B_RS07675 | Not Available | Positive | 1843291 - 1844340 | 39149.5 |
| pectinesterase family protein | Verru16B_RS07680 | Not Available | Positive | 1844337 - 1845401 | 38597.5 |
| glycoside hydrolase family 105 protein | Verru16B_RS07685 | Not Available | Positive | 1845419 - 1846816 | 51687.6 |
| alpha/beta hydrolase fold domain-containing protein | Verru16B_RS07690 | Not Available | Positive | 1846819 - 1848345 | 54117.2 |
| alpha-l-fucosidase | Verru16B_RS07695 | Not Available | Positive | 1848342 - 1850681 | 86628.3 |
| sdr family oxidoreductase | Verru16B_RS07700 | Not Available | Positive | 1850798 - 1851586 | 27733.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
