Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Verru16B_RS07605 | Not Available | Positive | 1824727 - 1825884 | 43013.4 |
| gdsl-type esterase/lipase family protein | Verru16B_RS07610 | Not Available | Negative | 1825964 - 1827352 | 51061.1 |
| class i sam-dependent methyltransferase | Verru16B_RS07615 | Not Available | Negative | 1827499 - 1828314 | 30105.0 |
| sugar kinase | Verru16B_RS07620 | Not Available | Negative | 1828449 - 1829543 | 39566.8 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | Verru16B_RS07625 | Not Available | Negative | 1829600 - 1830238 | 21616.4 |
| voc family protein | Verru16B_RS07630 | Not Available | Positive | 1830405 - 1830785 | 14126.8 |
| iclr family transcriptional regulator | Verru16B_RS07635 | Not Available | Negative | 1830841 - 1831647 | 29414.6 |
| tonb-dependent receptor | Verru16B_RS07640 | Not Available | Positive | 1831813 - 1835004 | 117012.0 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | Verru16B_RS07645 | Not Available | Positive | 1835137 - 1835976 | 31689.1 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | Verru16B_RS07650 | Not Available | Positive | 1835994 - 1836761 | 26884.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
