Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage holin family protein | Verru16B_RS07400 | Not Available | Negative | 1781081 - 1781473 | 14318.8 |
| glycine zipper domain-containing protein | Verru16B_RS07405 | Not Available | Negative | 1781517 - 1781834 | 11334.5 |
| pa2779 family protein | Verru16B_RS07410 | Not Available | Positive | 1782364 - 1782801 | 15237.8 |
| cysteine peptidase family c39 domain-containing protein | Verru16B_RS07415 | Not Available | Positive | 1782805 - 1783329 | 18777.8 |
| tetratricopeptide repeat protein | Verru16B_RS07420 | Not Available | Positive | 1783281 - 1783760 | 17046.5 |
| pas domain-containing protein | Verru16B_RS07425 | Not Available | Positive | 1783853 - 1784428 | 20434.5 |
| nitrogen regulation protein nr(ii) | Verru16B_RS07430 | Not Available | Positive | 1784587 - 1786269 | 60722.8 |
| hypothetical protein | Verru16B_RS18115 | Not Available | Positive | 1786416 - 1787621 | 40332.7 |
| marc family naat transporter | Verru16B_RS07440 | Not Available | Negative | 1787721 - 1788401 | 23691.8 |
| trna dihydrouridine synthase dusb | Verru16B_RS07445 | Not Available | Negative | 1788491 - 1789603 | 40651.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
