Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | Verru16B_RS07350 | Not Available | Positive | 1770274 - 1773033 | 100727.0 |
| phytase | Verru16B_RS17795 | Not Available | Positive | 1773192 - 1774862 | 60415.5 |
| hypothetical protein | Verru16B_RS07360 | Not Available | Positive | 1774945 - 1776174 | 43727.0 |
| duf3185 family protein | Verru16B_RS07365 | Not Available | Negative | 1776193 - 1776402 | 7092.8 |
| bon domain-containing protein | Verru16B_RS07370 | Not Available | Negative | 1776656 - 1777414 | 26688.0 |
| response regulator transcription factor | Verru16B_RS07375 | Not Available | Negative | 1777527 - 1778213 | 24995.5 |
| sensor histidine kinase | Verru16B_RS07380 | Not Available | Negative | 1778210 - 1779388 | 43650.0 |
| hypothetical protein | Verru16B_RS07385 | Not Available | Negative | 1779524 - 1779955 | 15341.4 |
| rna polymerase sigma factor | Verru16B_RS07390 | Not Available | Negative | 1780003 - 1780749 | 27355.6 |
| hypothetical protein | Verru16B_RS07395 | Not Available | Negative | 1780797 - 1781102 | 11073.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
