Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf167 domain-containing protein | Verru16B_RS07250 | Not Available | Negative | 1750550 - 1750840 | 10384.8 |
| plp-dependent transferase | Verru16B_RS07255 | Not Available | Negative | 1750911 - 1752428 | 54178.7 |
| exodeoxyribonuclease iii | Verru16B_RS07260 | Not Available | Positive | 1752683 - 1753438 | 27956.2 |
| set domain-containing protein | Verru16B_RS07265 | Not Available | Positive | 1753435 - 1753971 | 20046.0 |
| alpha/beta hydrolase-fold protein | Verru16B_RS07270 | Not Available | Positive | 1753989 - 1754909 | 34397.3 |
| hypothetical protein | Verru16B_RS07275 | Not Available | Negative | 1754917 - 1755387 | 17371.2 |
| cina family protein | Verru16B_RS07280 | Not Available | Positive | 1755472 - 1755972 | 17482.3 |
| lipid-binding sylf domain-containing protein | Verru16B_RS07285 | Not Available | Negative | 1756143 - 1756829 | 24892.2 |
| metallopeptidase family protein | Verru16B_RS07290 | Not Available | Negative | 1756934 - 1757308 | 13979.3 |
| hypothetical protein | Verru16B_RS07295 | Not Available | Positive | 1757466 - 1757888 | 16155.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
