Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | Verru16B_RS07000 | Not Available | Positive | 1695265 - 1696635 | 49412.5 |
| family 16 glycosylhydrolase | Verru16B_RS07005 | Not Available | Positive | 1696683 - 1697495 | 30729.8 |
| family 16 glycosylhydrolase | Verru16B_RS07010 | Not Available | Positive | 1697524 - 1698282 | 27782.8 |
| glycoside hydrolase family 28 protein | Verru16B_RS07015 | Not Available | Negative | 1698318 - 1699871 | 54464.0 |
| tonb-dependent siderophore receptor | Verru16B_RS07020 | Not Available | Negative | 1699941 - 1702208 | 82260.6 |
| laci family dna-binding transcriptional regulator | Verru16B_RS07025 | Not Available | Positive | 1702470 - 1703531 | 39463.6 |
| mfs transporter | Verru16B_RS07030 | Not Available | Positive | 1703657 - 1705108 | 53605.0 |
| hypothetical protein | Verru16B_RS07035 | Not Available | Positive | 1705164 - 1707308 | 79702.2 |
| hypothetical protein | Verru16B_RS07040 | Not Available | Positive | 1707410 - 1707937 | 19382.6 |
| dicarboxylate/amino acid:cation symporter | Verru16B_RS07045 | Not Available | Negative | 1707946 - 1709325 | 48094.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
