Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Verru16B_RS18310 | Not Available | Positive | 1679991 - 1680437 | 16502.1 |
| hypothetical protein | Verru16B_RS18315 | Not Available | Positive | 1680441 - 1682018 | 58918.6 |
| hypothetical protein | Verru16B_RS06965 | Not Available | Negative | 1682388 - 1682957 | 20958.4 |
| hypothetical protein | Verru16B_RS18320 | Not Available | Positive | 1683060 - 1683326 | 9209.21 |
| hypothetical protein | Verru16B_RS06970 | Not Available | Positive | 1685537 - 1685791 | 9531.43 |
| type ii toxin-antitoxin system hipa family toxin | Verru16B_RS06975 | Not Available | Negative | 1685898 - 1687226 | 48291.9 |
| tyrosine-type recombinase/integrase | Verru16B_RS06980 | Not Available | Negative | 1687643 - 1688986 | 50674.6 |
| adp-ribosylglycohydrolase family protein | Verru16B_RS06985 | Not Available | Negative | 1689158 - 1690537 | 50592.9 |
| laci family dna-binding transcriptional regulator | Verru16B_RS06990 | Not Available | Negative | 1690555 - 1691607 | 38848.8 |
| tonb-dependent siderophore receptor | Verru16B_RS06995 | Not Available | Positive | 1691993 - 1695004 | 108944.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
