Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heparinase ii/iii family protein | Verru16B_RS06910 | Not Available | Negative | 1666516 - 1668420 | 69405.9 |
| sgnh/gdsl hydrolase family protein | Verru16B_RS06915 | Not Available | Negative | 1668432 - 1669484 | 37540.8 |
| laci family dna-binding transcriptional regulator | Verru16B_RS06920 | Not Available | Negative | 1669532 - 1670563 | 39087.9 |
| glycosidase | Verru16B_RS06925 | Not Available | Negative | 1670617 - 1671651 | 38514.7 |
| tonb-dependent siderophore receptor | Verru16B_RS06930 | Not Available | Negative | 1671739 - 1673997 | 83960.7 |
| thua domain-containing protein | Verru16B_RS17780 | Not Available | Positive | 1674271 - 1674918 | 23845.7 |
| hypothetical protein | Verru16B_RS18300 | Not Available | Positive | 1675169 - 1675684 | 19711.6 |
| hypothetical protein | Verru16B_RS06940 | Not Available | Positive | 1675903 - 1676148 | 9086.84 |
| hypothetical protein | Verru16B_RS18305 | Not Available | Positive | 1678657 - 1678830 | 6302.6 |
| parb n-terminal domain-containing protein | Verru16B_RS06955 | Not Available | Positive | 1678838 - 1679956 | 41326.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
