Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | Verru16B_RS06810 | Not Available | Positive | 1632322 - 1633350 | 39171.3 |
| hypothetical protein | Verru16B_RS06815 | Not Available | Negative | 1633373 - 1635790 | 87884.1 |
| fg-gap-like repeat-containing protein | Verru16B_RS06820 | Not Available | Positive | 1635939 - 1639559 | 130489.0 |
| tonb-dependent siderophore receptor | Verru16B_RS06825 | Not Available | Positive | 1639871 - 1642858 | 109050.0 |
| beta-galactosidase | Verru16B_RS06830 | Not Available | Positive | 1643020 - 1645020 | 75042.6 |
| alpha/beta hydrolase | Verru16B_RS06835 | Not Available | Positive | 1645122 - 1646003 | 32282.7 |
| sodium:solute symporter family protein | Verru16B_RS06840 | Not Available | Positive | 1646692 - 1648458 | 64681.3 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | Verru16B_RS06845 | Not Available | Positive | 1648455 - 1650575 | 75847.3 |
| duf1961 family protein | Verru16B_RS06850 | Not Available | Negative | 1650662 - 1652164 | 56125.8 |
| endo-1,4-beta-xylanase | Verru16B_RS06855 | Not Available | Negative | 1652169 - 1653287 | 42291.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
