Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate synthase a | Verru16B_RS06710 | Not Available | Negative | 1606346 - 1607938 | 58767.7 |
| nucleoside deaminase | Verru16B_RS06715 | Not Available | Positive | 1608088 - 1608588 | 18364.9 |
| 3-isopropylmalate dehydrogenase | Verru16B_RS06720 | Not Available | Positive | 1608596 - 1609797 | 44148.0 |
| hypothetical protein | Verru16B_RS06725 | Not Available | Positive | 1609873 - 1611576 | 62801.0 |
| hypothetical protein | Verru16B_RS06730 | Not Available | Negative | 1611697 - 1613094 | 52280.3 |
| ncs2 family permease | Verru16B_RS06735 | Not Available | Negative | 1613226 - 1614560 | 45778.7 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | Verru16B_RS06740 | Not Available | Negative | 1614566 - 1615402 | 29724.8 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | Verru16B_RS06745 | Not Available | Negative | 1615399 - 1616151 | 26888.5 |
| purine nucleoside permease | Verru16B_RS06750 | Not Available | Negative | 1616148 - 1617227 | 38824.9 |
| tonb-dependent siderophore receptor | Verru16B_RS06755 | Not Available | Positive | 1617357 - 1619711 | 86243.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
