Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | Verru16B_RS06610 | Not Available | Negative | 1583606 - 1584001 | 14325.5 |
| zinc-binding alcohol dehydrogenase family protein | Verru16B_RS06615 | Not Available | Negative | 1584137 - 1585153 | 36125.9 |
| arac family transcriptional regulator | Verru16B_RS06620 | Not Available | Negative | 1585268 - 1586152 | 32337.1 |
| sdr family oxidoreductase | Verru16B_RS06625 | Not Available | Positive | 1586308 - 1587102 | 27602.3 |
| l-rhamnose mutarotase | Verru16B_RS06630 | Not Available | Positive | 1587211 - 1587570 | 14172.7 |
| amidohydrolase | Verru16B_RS06635 | Not Available | Positive | 1587726 - 1588541 | 29798.9 |
| sdr family nad(p)-dependent oxidoreductase | Verru16B_RS06640 | Not Available | Positive | 1588549 - 1589304 | 26371.8 |
| l-fuconate dehydratase | Verru16B_RS06645 | Not Available | Positive | 1589569 - 1590813 | 45350.5 |
| fumarylacetoacetate hydrolase family protein | Verru16B_RS06650 | Not Available | Positive | 1590848 - 1591657 | 29048.1 |
| substrate-binding domain-containing protein | Verru16B_RS06655 | Not Available | Positive | 1591899 - 1592840 | 33289.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
