Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor/glpr family dna-binding transcription regulator | Verru16B_RS06510 | Not Available | Positive | 1559351 - 1560136 | 27535.5 |
| bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase | Verru16B_RS06515 | Not Available | Positive | 1560273 - 1562465 | 78869.1 |
| rhamnulokinase family protein | Verru16B_RS06520 | Not Available | Positive | 1562624 - 1564075 | 51865.6 |
| l-rhamnose isomerase | Verru16B_RS06525 | Not Available | Positive | 1564181 - 1565452 | 47215.9 |
| malate dehydrogenase (quinone) | Verru16B_RS06530 | Not Available | Positive | 1565569 - 1567068 | 54158.2 |
| ydei family protein | Verru16B_RS06535 | Not Available | Negative | 1567349 - 1567948 | 22183.2 |
| hypothetical protein | Verru16B_RS06540 | Not Available | Positive | 1568264 - 1568449 | 6952.24 |
| type ii toxin-antitoxin system rele/pare family toxin | Verru16B_RS06545 | Not Available | Positive | 1568434 - 1568739 | 11370.0 |
| hypothetical protein | Verru16B_RS06550 | Not Available | Positive | 1569037 - 1569582 | 20417.4 |
| atp-dependent endonuclease | Verru16B_RS06555 | Not Available | Positive | 1569796 - 1571571 | 65347.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
