Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase 43 family protein | Verru16B_RS06460 | Not Available | Negative | 1543365 - 1545482 | 76990.2 |
| rhamnogalacturonan acetylesterase | Verru16B_RS06465 | Not Available | Negative | 1545598 - 1546881 | 47001.4 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | Verru16B_RS06470 | Not Available | Negative | 1546917 - 1549283 | 85635.7 |
| pkd domain containing protein | Verru16B_RS06475 | Not Available | Negative | 1549316 - 1550197 | 32369.2 |
| alpha/beta hydrolase | Verru16B_RS06480 | Not Available | Negative | 1550197 - 1551138 | 33445.1 |
| family 43 glycosylhydrolase | Verru16B_RS06485 | Not Available | Negative | 1551158 - 1552210 | 39151.7 |
| alpha-l-fucosidase | Verru16B_RS06490 | Not Available | Negative | 1552280 - 1553965 | 61350.6 |
| glycosyl hydrolase | Verru16B_RS06495 | Not Available | Negative | 1554155 - 1555192 | 37636.4 |
| alpha-n-arabinofuranosidase | Verru16B_RS06500 | Not Available | Negative | 1555378 - 1556922 | 56626.8 |
| beta-galactosidase | Verru16B_RS06505 | Not Available | Positive | 1557138 - 1559150 | 74198.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
