Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase/peroxidase hpi | Verru16B_RS00620 | Not Available | Positive | 136698 - 138917 | 80492.8 |
| Trna-leu | Not Available | Not Available | Positive | 139035 - 139122 | Not Available |
| class i sam-dependent methyltransferase | Verru16B_RS00630 | Not Available | Positive | 139338 - 139904 | 21113.6 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | Verru16B_RS00635 | Not Available | Positive | 139995 - 140747 | 26489.8 |
| gxxexxy protein | Verru16B_RS00640 | Not Available | Positive | 140783 - 141169 | 14407.7 |
| 3-deoxy-8-phosphooctulonate synthase | Verru16B_RS00645 | Not Available | Negative | 141202 - 141993 | 28221.6 |
| ctp synthase | Verru16B_RS00650 | Not Available | Negative | 142018 - 143652 | 60000.9 |
| duf6941 family protein | Verru16B_RS00655 | Not Available | Positive | 143758 - 144138 | 14148.1 |
| adenosine kinase | Verru16B_RS00660 | Not Available | Positive | 144317 - 145312 | 34583.2 |
| hypothetical protein | Verru16B_RS00665 | Not Available | Positive | 145404 - 145943 | 19487.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
