Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | Verru16B_RS18655 | Not Available | Positive | 1497639 - 1498625 | 34714.9 |
| tonb-dependent receptor plug domain-containing protein | Verru16B_RS06315 | Not Available | Positive | 1498826 - 1502518 | 136102.0 |
| sodium:solute symporter | Verru16B_RS06320 | Not Available | Positive | 1502736 - 1504769 | 73467.9 |
| glycoside hydrolase family 2 | Verru16B_RS06325 | Not Available | Positive | 1504779 - 1507382 | 96011.3 |
| glycoside hydrolase family 43 protein | Verru16B_RS06330 | Not Available | Positive | 1507385 - 1508362 | 36612.5 |
| duf6250 domain-containing protein | Verru16B_RS06335 | Not Available | Negative | 1508310 - 1509002 | 25483.0 |
| rhamnogalacturonan acetylesterase | Verru16B_RS06340 | Not Available | Positive | 1509060 - 1510664 | 57862.5 |
| laci family dna-binding transcriptional regulator | Verru16B_RS06345 | Not Available | Negative | 1510711 - 1511742 | 38349.7 |
| l-rhamnose mutarotase | Verru16B_RS06350 | Not Available | Positive | 1512045 - 1512359 | 12319.6 |
| tat pathway signal sequence domain protein | Verru16B_RS06355 | Not Available | Positive | 1512516 - 1515323 | 102418.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
