Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i mannose-6-phosphate isomerase | Verru16B_RS06260 | Not Available | Negative | 1483830 - 1484936 | 39850.7 |
| sdr family oxidoreductase | Verru16B_RS06265 | Not Available | Negative | 1484943 - 1485701 | 25754.2 |
| sodium:solute symporter family transporter | Verru16B_RS06270 | Not Available | Negative | 1485698 - 1487446 | 63806.2 |
| laci family dna-binding transcriptional regulator | Verru16B_RS06275 | Not Available | Negative | 1487549 - 1488592 | 37276.0 |
| gfo/idh/moca family oxidoreductase | Verru16B_RS06280 | Not Available | Negative | 1488761 - 1490116 | 50718.1 |
| glycosyl hydrolase | Verru16B_RS06285 | Not Available | Negative | 1490113 - 1492683 | 93927.2 |
| gfo/idh/moca family protein | Verru16B_RS06290 | Not Available | Positive | 1492904 - 1494082 | 43101.7 |
| sugar abc transporter atp-binding protein | Verru16B_RS06295 | Not Available | Positive | 1494149 - 1495666 | 53012.9 |
| abc transporter permease | Verru16B_RS06300 | Not Available | Positive | 1495699 - 1496592 | 30315.2 |
| abc transporter permease | Verru16B_RS18650 | Not Available | Positive | 1496589 - 1497617 | 35876.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
