Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | Verru16B_RS06210 | Not Available | Negative | 1468627 - 1470135 | 54756.0 |
| ribulokinase | Verru16B_RS06215 | Not Available | Negative | 1470253 - 1471911 | 59255.3 |
| laci family dna-binding transcriptional regulator | Verru16B_RS06220 | Not Available | Positive | 1472106 - 1473188 | 40143.3 |
| tonb-dependent siderophore receptor | Verru16B_RS06225 | Not Available | Positive | 1473315 - 1475711 | 87580.2 |
| sugar phosphate isomerase/epimerase | Verru16B_RS06230 | Not Available | Positive | 1475823 - 1476614 | 28388.0 |
| alpha/beta hydrolase | Verru16B_RS06235 | Not Available | Negative | 1476719 - 1477621 | 31655.9 |
| alginate lyase family protein | Verru16B_RS06240 | Not Available | Negative | 1477628 - 1478764 | 41789.2 |
| heparinase ii/iii family protein | Verru16B_RS06245 | Not Available | Negative | 1478742 - 1480931 | 80894.0 |
| duf2264 domain-containing protein | Verru16B_RS06250 | Not Available | Negative | 1480933 - 1482798 | 68842.4 |
| nad(p)-dependent oxidoreductase | Verru16B_RS06255 | Not Available | Negative | 1482795 - 1483799 | 36246.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
