Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | Verru16B_RS05960 | Not Available | Negative | 1416457 - 1419783 | 120066.0 |
| efflux rnd transporter periplasmic adaptor subunit | Verru16B_RS05965 | Not Available | Negative | 1419780 - 1420796 | 35079.5 |
| duf2892 domain-containing protein | Verru16B_RS05970 | Not Available | Negative | 1420806 - 1421030 | 8175.18 |
| metalloregulator arsr/smtb family transcription factor | Verru16B_RS05975 | Not Available | Positive | 1421108 - 1421446 | 12333.1 |
| methylglyoxal synthase | Verru16B_RS05980 | Not Available | Positive | 1421456 - 1421950 | 18222.3 |
| hypothetical protein | Verru16B_RS05985 | Not Available | Positive | 1422135 - 1423052 | 32628.3 |
| glycosyltransferase | Verru16B_RS05990 | Not Available | Positive | 1423049 - 1424275 | 43493.9 |
| membrane protein insertase yidc | Verru16B_RS05995 | Not Available | Negative | 1424367 - 1426169 | 65143.3 |
| membrane protein insertion efficiency factor yidd | Verru16B_RS06000 | Not Available | Negative | 1426213 - 1426557 | 12086.7 |
| ribonuclease p protein component | Verru16B_RS06005 | Not Available | Negative | 1426550 - 1426918 | 13743.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
