Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lon peptidase substrate-binding domain-containing protein | Verru16B_RS00570 | Not Available | Positive | 127824 - 128504 | 25477.9 |
| Trna-thr | Not Available | Not Available | Positive | 128928 - 129003 | Not Available |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | Verru16B_RS00580 | Not Available | Positive | 129067 - 130269 | 43395.8 |
| hypothetical protein | Verru16B_RS00585 | Not Available | Positive | 130334 - 130639 | 10619.9 |
| ycei family protein | Verru16B_RS00590 | Not Available | Positive | 130636 - 131256 | 21351.7 |
| m48 family metallopeptidase | Verru16B_RS00595 | Not Available | Positive | 131408 - 131767 | 13150.3 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | Verru16B_RS00600 | Not Available | Positive | 131978 - 132955 | 36004.5 |
| sugar phosphate isomerase/epimerase | Verru16B_RS00605 | Not Available | Negative | 133206 - 134192 | 35071.9 |
| glycoside hydrolase family 2 protein | Verru16B_RS00610 | Not Available | Negative | 134228 - 136060 | 68266.0 |
| hypothetical protein | Verru16B_RS00615 | Not Available | Positive | 136251 - 136538 | 10729.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
