Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb family protein | Verru16B_RS05810 | Not Available | Positive | 1386370 - 1387485 | 40448.4 |
| hypothetical protein | Verru16B_RS05815 | Not Available | Positive | 1387544 - 1388008 | 17534.6 |
| ycei family protein | Verru16B_RS05820 | Not Available | Positive | 1388105 - 1388659 | 20068.3 |
| pitrilysin family protein | Verru16B_RS05825 | Not Available | Negative | 1388785 - 1391640 | 104753.0 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | Verru16B_RS05830 | Not Available | Negative | 1391828 - 1392442 | 22113.0 |
| imidazole glycerol phosphate synthase subunit hisf | Verru16B_RS05835 | Not Available | Negative | 1392525 - 1393292 | 27741.2 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | Verru16B_RS05840 | Not Available | Negative | 1393286 - 1394011 | 25620.9 |
| imidazole glycerol phosphate synthase subunit hish | Verru16B_RS05845 | Not Available | Negative | 1394061 - 1394657 | 20747.3 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | Verru16B_RS05850 | Not Available | Negative | 1394654 - 1395718 | 38871.9 |
| histidinol-phosphate transaminase | Verru16B_RS05855 | Not Available | Negative | 1395810 - 1396874 | 37871.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
