Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 9 protein | Verru16B_RS05760 | Not Available | Negative | 1371804 - 1374383 | 93474.6 |
| mfs transporter | Verru16B_RS05765 | Not Available | Negative | 1374485 - 1375795 | 47756.1 |
| polysaccharide deacetylase family protein | Verru16B_RS05770 | Not Available | Positive | 1376003 - 1377049 | 37341.9 |
| nucleoside hydrolase | Verru16B_RS05775 | Not Available | Negative | 1377069 - 1378016 | 33380.1 |
| duf1643 domain-containing protein | Verru16B_RS05780 | Not Available | Negative | 1378126 - 1378611 | 18066.7 |
| dead/deah box helicase | Verru16B_RS05785 | Not Available | Negative | 1378638 - 1381937 | 119845.0 |
| glycine--trna ligase | Verru16B_RS05790 | Not Available | Negative | 1381985 - 1383511 | 57392.3 |
| heme-binding protein | Verru16B_RS05795 | Not Available | Negative | 1383719 - 1384222 | 17896.5 |
| hypothetical protein | Verru16B_RS18290 | Not Available | Negative | 1384423 - 1385280 | 30772.1 |
| energy transducer tonb | Verru16B_RS18295 | Not Available | Positive | 1385416 - 1386123 | 25006.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
