Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphatase domain-containing protein | Verru16B_RS17760 | Not Available | Positive | 1328716 - 1329363 | 23946.7 |
| rna polymerase sigma factor | Verru16B_RS05565 | Not Available | Negative | 1329747 - 1330328 | 21513.8 |
| hypothetical protein | Verru16B_RS05570 | Not Available | Negative | 1330332 - 1330817 | 17857.5 |
| hypothetical protein | Verru16B_RS05575 | Not Available | Negative | 1330814 - 1331116 | 11049.2 |
| hypothetical protein | Verru16B_RS05580 | Not Available | Positive | 1331268 - 1331513 | 8318.97 |
| hypothetical protein | Verru16B_RS05585 | Not Available | Positive | 1331617 - 1332042 | 15055.1 |
| tolc family protein | Verru16B_RS05590 | Not Available | Positive | 1332086 - 1333345 | 45164.3 |
| yhs domain-containing protein | Verru16B_RS05595 | Not Available | Positive | 1333342 - 1333755 | 14299.4 |
| efflux rnd transporter periplasmic adaptor subunit | Verru16B_RS05600 | Not Available | Positive | 1333761 - 1335074 | 47152.1 |
| efflux rnd transporter permease subunit | Verru16B_RS05605 | Not Available | Positive | 1335119 - 1338853 | 136075.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
