Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pep-cterm sorting domain-containing protein | Verru16B_RS05405 | Not Available | Positive | 1293134 - 1294015 | 30887.0 |
| hypothetical protein | Verru16B_RS18270 | Not Available | Positive | 1294012 - 1294182 | 6250.63 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | Verru16B_RS05410 | Not Available | Positive | 1294450 - 1295811 | 50732.0 |
| hypothetical protein | Verru16B_RS05415 | Not Available | Positive | 1295902 - 1296447 | 19641.5 |
| guanylate kinase | Verru16B_RS05420 | Not Available | Positive | 1296451 - 1297053 | 22374.9 |
| mbl fold metallo-hydrolase | Verru16B_RS05425 | Not Available | Positive | 1297093 - 1298154 | 39214.8 |
| hypothetical protein | Verru16B_RS05430 | Not Available | Negative | 1298168 - 1298953 | 29820.2 |
| outer membrane protein | Verru16B_RS05435 | Not Available | Positive | 1299144 - 1299926 | 28142.1 |
| l-aspartate oxidase | Verru16B_RS05440 | Not Available | Negative | 1299965 - 1301521 | 55644.7 |
| carboxylating nicotinate-nucleotide diphosphorylase | Verru16B_RS05445 | Not Available | Negative | 1301598 - 1302440 | 29524.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
