Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Verru16B_RS05360 | Not Available | Positive | 1280311 - 1281936 | 60484.7 |
| response regulator | Verru16B_RS05365 | Not Available | Positive | 1282114 - 1284756 | 94713.3 |
| hypothetical protein | Verru16B_RS05370 | Not Available | Positive | 1284802 - 1285476 | 23507.9 |
| response regulator transcription factor | Verru16B_RS05375 | Not Available | Positive | 1285578 - 1286231 | 24037.3 |
| hypothetical protein | Verru16B_RS05380 | Not Available | Positive | 1286332 - 1286667 | 11705.6 |
| hypothetical protein | Verru16B_RS18260 | Not Available | Positive | 1286897 - 1287037 | 5313.42 |
| 5'-nucleotidase c-terminal domain-containing protein | Verru16B_RS05385 | Not Available | Negative | 1287056 - 1288429 | 48624.9 |
| sensor histidine kinase | Verru16B_RS05390 | Not Available | Positive | 1288542 - 1291397 | 101394.0 |
| response regulator transcription factor | Verru16B_RS05395 | Not Available | Positive | 1291478 - 1292089 | 21874.5 |
| pep-cterm sorting domain-containing protein | Verru16B_RS18755 | Not Available | Positive | 1292232 - 1293026 | 27793.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
