Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | Verru16B_RS05310 | Not Available | Negative | 1269691 - 1271160 | 53128.9 |
| pyridoxamine 5'-phosphate oxidase | Verru16B_RS05315 | Not Available | Negative | 1271206 - 1271844 | 24118.7 |
| m20 family metallopeptidase | Verru16B_RS05320 | Not Available | Positive | 1271969 - 1273204 | 44692.4 |
| marc family protein | Verru16B_RS05325 | Not Available | Negative | 1273282 - 1273866 | 20256.5 |
| nitrogen regulation protein nr(ii) | Verru16B_RS05330 | Not Available | Negative | 1273918 - 1275084 | 41806.4 |
| hypothetical protein | Verru16B_RS05335 | Not Available | Positive | 1275254 - 1275526 | 10236.3 |
| tigr01777 family oxidoreductase | Verru16B_RS05340 | Not Available | Negative | 1275704 - 1276615 | 32457.2 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | Verru16B_RS05345 | Not Available | Positive | 1276719 - 1277768 | 38534.6 |
| omph family outer membrane protein | Verru16B_RS05350 | Not Available | Positive | 1277958 - 1278536 | 20590.7 |
| hypothetical protein | Verru16B_RS05355 | Not Available | Negative | 1278762 - 1280135 | 48952.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
