Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-cyano-7-deazaguanine synthase quec | Verru16B_RS05260 | Not Available | Negative | 1257558 - 1258247 | 24589.4 |
| glycerophosphodiester phosphodiesterase | Verru16B_RS05265 | Not Available | Positive | 1258361 - 1259050 | 24616.0 |
| histone deacetylase | Verru16B_RS05270 | Not Available | Positive | 1259096 - 1259953 | 30628.2 |
| ribonuclease d | Verru16B_RS05275 | Not Available | Positive | 1259961 - 1261073 | 42262.1 |
| fatty acid coa ligase family protein | Verru16B_RS05280 | Not Available | Positive | 1261107 - 1262888 | 63632.1 |
| nad-dependent epimerase/dehydratase family protein | Verru16B_RS05285 | Not Available | Positive | 1262989 - 1264086 | 39354.4 |
| rna methyltransferase | Verru16B_RS05290 | Not Available | Negative | 1264219 - 1265022 | 29555.7 |
| class i sam-dependent rna methyltransferase | Verru16B_RS05295 | Not Available | Positive | 1265108 - 1266376 | 46896.2 |
| s9 family peptidase | Verru16B_RS05300 | Not Available | Negative | 1266799 - 1268904 | 76805.0 |
| lipoyl protein ligase domain-containing protein | Verru16B_RS05305 | Not Available | Negative | 1268973 - 1269680 | 26181.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
