Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | Verru16B_RS05120 | Not Available | Positive | 1227635 - 1228420 | 27121.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | Verru16B_RS05125 | Not Available | Positive | 1228465 - 1229817 | 48162.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | Verru16B_RS05130 | Not Available | Positive | 1229860 - 1231740 | 69111.9 |
| response regulator | Verru16B_RS05135 | Not Available | Positive | 1231989 - 1232690 | 26287.1 |
| cell wall metabolism sensor histidine kinase walk | Verru16B_RS05140 | Not Available | Positive | 1232687 - 1233958 | 47455.1 |
| trna (guanosine(46)-n(7))-methyltransferase trmb | Verru16B_RS05145 | Not Available | Positive | 1234101 - 1234727 | 23346.1 |
| hypothetical protein | Verru16B_RS18250 | Not Available | Negative | 1234740 - 1234904 | 6075.49 |
| f0f1 atp synthase subunit a | Verru16B_RS05150 | Not Available | Positive | 1235102 - 1235968 | 31358.8 |
| atp synthase f0 subunit c | Verru16B_RS05155 | Not Available | Positive | 1236036 - 1236245 | 6747.57 |
| f0f1 atp synthase subunit b | Verru16B_RS05160 | Not Available | Positive | 1236307 - 1236882 | 20827.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
