Kingdom
Pseudomonadati
Phylum
Verrucomicrobiota
Class
Opitutia
Order
Opitutales
Family
Opitutaceae
Genus
Lacunisphaera
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Verrucomicrobiota |
| Class | Opitutia |
| Order | Opitutales |
| Family | Opitutaceae |
| Genus | Lacunisphaera |
| Species | Lacunisphaera limnophila |
| Strain | IG16b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
703412 bp
Thymine Count
704368 bp
Guanine Count
1404141 bp
Cytosine Count
1387363 bp
Genome Length
4199284 bp
Protein-coding Genes
3527 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | Verru16B_RS04920 | Not Available | Positive | 1182836 - 1184068 | 44562.6 |
| hypothetical protein | Verru16B_RS04925 | Not Available | Negative | 1184103 - 1185359 | 44748.4 |
| beta-galactosidase galb | Verru16B_RS04930 | Not Available | Negative | 1185388 - 1188123 | 100724.0 |
| tonb-dependent receptor plug domain-containing protein | Verru16B_RS04935 | Not Available | Negative | 1188287 - 1192036 | 136418.0 |
| cap domain-containing protein | Verru16B_RS04940 | Not Available | Negative | 1192425 - 1193036 | 22695.2 |
| mbl fold metallo-hydrolase | Verru16B_RS04945 | Not Available | Negative | 1193063 - 1194001 | 33652.5 |
| rna polymerase sigma factor | Verru16B_RS04950 | Not Available | Positive | 1194104 - 1194736 | 24120.8 |
| zf-hc2 domain-containing protein | Verru16B_RS19095 | Not Available | Positive | 1194805 - 1195722 | 32882.1 |
| duf4097 family beta strand repeat-containing protein | Verru16B_RS04960 | Not Available | Positive | 1195719 - 1196759 | 36717.7 |
| atp-binding protein | Verru16B_RS04965 | Not Available | Positive | 1196895 - 1199465 | 94084.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
