Desulfotomaculum copahuensis str. LMa1

rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Desulfotomaculaceae

Genus

Desulfotomaculum

Description

Desulfotomaculum copahuensis str. LMa1 is a Gram-positive, rod-shaped bacterium. This organism is notable for possessing a single replicon, which is relevant for its genetic stability and replication processes. The strain is cataloged under the accession number LYVF00000000.1, providing a reference for researchers seeking to access genomic information or related studies. As a member of the genus Desulfotomaculum, this bacterium is likely involved in sulfate-reducing processes, which are critical in various ecological contexts, particularly in the biogeochemical cycling of sulfur. Sulfate-reducing bacteria such as Desulfotomaculum species are known to thrive in anaerobic environments and play significant roles in the degradation of organic matter. The ecological insight into Desulfotomaculum copahuensis str. LMa1 hinges on its potential contributions to the sulfur cycle within its habitat. By reducing sulfate to sulfide, this bacterium can influence the availability of sulfur compounds in its environment, impacting both microbial community dynamics and nutrient cycling. Understanding such organisms can provide valuable context for their roles in anaerobic ecosystems and their applications in bioremediation and bioenergy production.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyDesulfotomaculaceae
GenusDesulfotomaculum
SpeciesDesulfotomaculum copahuensis
StrainLMa1

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfotomaculum copahuensis strain LMa1 LMA27_trimmed_contig_99,

Gene Summary

Adenine Count

779203 bp

Thymine Count

778756 bp

Guanine Count

1035300 bp

Cytosine Count

1035528 bp

Genome Length

3628787 bp

Protein-coding Genes

3281 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
(2fe-2s)-binding proteinA6M21_16040Not AvailablePositive3540750 - 35410289872.23
fad-dependent oxidoreductaseA6M21_16045Not AvailablePositive3541021 - 354216341156.1
l-glutamate gamma-semialdehyde dehydrogenaseA6M21_16050Not AvailablePositive3542314 - 354386155816.8
sigma-54-dependent fis family transcriptional regulatorA6M21_16055Not AvailablePositive3543888 - 354570266168.3
sigma-54-dependent fis family transcriptional regulatorA6M21_16060Not AvailableNegative3545861 - 354747460115.8
abc transporter atp-binding proteinA6M21_16065Not AvailableNegative3547487 - 354819125210.1
abc transporter atp-binding proteinA6M21_16070Not AvailableNegative3548194 - 354896428196.6
branched-chain amino acid abc transporter permeaseA6M21_16075Not AvailableNegative3548974 - 354985831754.9
abc transporter permeaseA6M21_16080Not AvailableNegative3549865 - 355073730859.0
branched-chain amino acid abc transporter substrate-binding proteinA6M21_16085Not AvailableNegative3550811 - 355201642257.1

Displaying genes 3321 – 3330 of 3383 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.