Desulfotomaculum copahuensis str. LMa1

rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Desulfotomaculaceae

Genus

Desulfotomaculum

Description

Desulfotomaculum copahuensis str. LMa1 is a Gram-positive, rod-shaped bacterium. This organism is notable for possessing a single replicon, which is relevant for its genetic stability and replication processes. The strain is cataloged under the accession number LYVF00000000.1, providing a reference for researchers seeking to access genomic information or related studies. As a member of the genus Desulfotomaculum, this bacterium is likely involved in sulfate-reducing processes, which are critical in various ecological contexts, particularly in the biogeochemical cycling of sulfur. Sulfate-reducing bacteria such as Desulfotomaculum species are known to thrive in anaerobic environments and play significant roles in the degradation of organic matter. The ecological insight into Desulfotomaculum copahuensis str. LMa1 hinges on its potential contributions to the sulfur cycle within its habitat. By reducing sulfate to sulfide, this bacterium can influence the availability of sulfur compounds in its environment, impacting both microbial community dynamics and nutrient cycling. Understanding such organisms can provide valuable context for their roles in anaerobic ecosystems and their applications in bioremediation and bioenergy production.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyDesulfotomaculaceae
GenusDesulfotomaculum
SpeciesDesulfotomaculum copahuensis
StrainLMa1

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfotomaculum copahuensis strain LMa1 LMA27_trimmed_contig_99,

Gene Summary

Adenine Count

779203 bp

Thymine Count

778756 bp

Guanine Count

1035300 bp

Cytosine Count

1035528 bp

Genome Length

3628787 bp

Protein-coding Genes

3281 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii-a crispr-associated ramp protein csm3A6M21_00590Not AvailablePositive2788918 - 278970929327.0
type iii-a crispr-associated ramp protein csm4A6M21_00595Not AvailablePositive2789709 - 279070135914.6
type iii-a crispr-associated ramp protein csm5A6M21_00600Not AvailablePositive2790686 - 279187344361.4
crispr-associated endoribonuclease cas6A6M21_00605Not AvailablePositive2791894 - 279270630885.2
hypothetical proteinA6M21_00610Not AvailablePositive2792711 - 279404846653.6
carbon-monoxide dehydrogenase catalytic subunitA6M21_00615Not AvailablePositive2794082 - 279598665970.8
4fe-4s ferredoxinA6M21_00620Not AvailablePositive2795997 - 279650317926.8
hypothetical proteinA6M21_00625Not AvailableNegative2796692 - 279907083983.2
hypothetical proteinA6M21_00630Not AvailablePositive2799299 - 280138674206.9
hypothetical proteinA6M21_00635Not AvailableNegative2801780 - 280205510273.6

Displaying genes 2611 – 2620 of 3383 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.