Limnohabitans sp. JirII-29

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. JirII-29 is characterized by a single replicon, indicating a streamlined genomic structure. This organism is cataloged under the accession number NESB00000000.1, which facilitates its identification and reference in biological databases. The genus Limnohabitans is known for its ecological role in freshwater environments, particularly in lakes and ponds. Members of this genus are often involved in the cycling of nutrients and can contribute to the maintenance of water quality. The presence of Limnohabitans sp. JirII-29 suggests it may play a specific role in the microbial communities within its habitat, potentially influencing biogeochemical processes. Given its single replicon, Limnohabitans sp. JirII-29 may exhibit certain metabolic efficiencies that could be beneficial in fluctuating environmental conditions typical of freshwater ecosystems. Streamlined genomes can often lead to faster growth rates and adaptability, which are crucial traits for survival in dynamic habitats. Overall, the study of Limnohabitans sp. JirII-29 enhances our understanding of microbial diversity and functionality in freshwater systems, underscoring the importance of such microorganisms in ecological balance and nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. JirII-29
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. JirII-29 LimA-JirII-29-C31, whole genome shotgun

Gene Summary

Adenine Count

726266 bp

Thymine Count

730350 bp

Guanine Count

1008937 bp

Cytosine Count

1002557 bp

Genome Length

3468110 bp

Protein-coding Genes

3271 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methylmalonate-semialdehyde dehydrogenase (coa acylating)B9Z39_16570Not AvailablePositive3381772 - 338328353986.3
choline dehydrogenaseB9Z39_16575Not AvailablePositive3383411 - 338513262881.5
hypothetical proteinB9Z39_16580Not AvailablePositive3385346 - 338610427266.7
penicillin-binding protein 2B9Z39_16585Not AvailableNegative3386114 - 338812074363.3
rod shape-determining protein mredB9Z39_16590Not AvailableNegative3388117 - 338864719325.6
rod shape-determining protein mrecB9Z39_16595Not AvailableNegative3388644 - 338956433286.6
rod shape-determining proteinB9Z39_16600Not AvailableNegative3389605 - 339064836929.0
aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit cB9Z39_16605Not AvailablePositive3390824 - 339113211263.5
aspartyl/glutamyl-trna amidotransferase subunit aB9Z39_16610Not AvailablePositive3391136 - 339259651358.8
glutaminyl-trna synthase (glutamine-hydrolyzing) subunit bB9Z39_16615Not AvailablePositive3392602 - 339408654191.4

Displaying genes 3271 – 3280 of 3324 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.