Limnohabitans sp. JirII-29

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. JirII-29 is characterized by a single replicon, indicating a streamlined genomic structure. This organism is cataloged under the accession number NESB00000000.1, which facilitates its identification and reference in biological databases. The genus Limnohabitans is known for its ecological role in freshwater environments, particularly in lakes and ponds. Members of this genus are often involved in the cycling of nutrients and can contribute to the maintenance of water quality. The presence of Limnohabitans sp. JirII-29 suggests it may play a specific role in the microbial communities within its habitat, potentially influencing biogeochemical processes. Given its single replicon, Limnohabitans sp. JirII-29 may exhibit certain metabolic efficiencies that could be beneficial in fluctuating environmental conditions typical of freshwater ecosystems. Streamlined genomes can often lead to faster growth rates and adaptability, which are crucial traits for survival in dynamic habitats. Overall, the study of Limnohabitans sp. JirII-29 enhances our understanding of microbial diversity and functionality in freshwater systems, underscoring the importance of such microorganisms in ecological balance and nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. JirII-29
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. JirII-29 LimA-JirII-29-C31, whole genome shotgun

Gene Summary

Adenine Count

726266 bp

Thymine Count

730350 bp

Guanine Count

1008937 bp

Cytosine Count

1002557 bp

Genome Length

3468110 bp

Protein-coding Genes

3271 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
murein hydrolase effector protein lrgbB9Z39_14685Not AvailablePositive3007424 - 300815225261.5
nyn domain-containing proteinB9Z39_14690Not AvailableNegative3008158 - 300886226716.1
oxidoreductaseB9Z39_14695Not AvailableNegative3009039 - 301008536963.3
d-amino acid dehydrogenaseB9Z39_14700Not AvailableNegative3010191 - 301146545819.8
amidohydrolaseB9Z39_14705Not AvailableNegative3011747 - 301292241636.7
abc transporter substrate-binding proteinB9Z39_14710Not AvailableNegative3012924 - 301391035444.2
lysr family transcriptional regulatorB9Z39_14715Not AvailablePositive3014034 - 301494833562.0
molybdenum abc transporter atp-binding proteinB9Z39_14720Not AvailableNegative3014941 - 301601738470.8
molybdenum abc transporter permease subunitB9Z39_14725Not AvailableNegative3016014 - 301669724588.3
molybdate abc transporter substrate-binding proteinB9Z39_14730Not AvailableNegative3016723 - 301748727361.0

Displaying genes 2901 – 2910 of 3324 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.