Saccharothrix sp. CB00851

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Saccharothrix

Description

Saccharothrix sp. CB00851 is characterized by possessing a single replicon, which is indicative of its genomic structure. The complete genomic information for this strain is available under the accession number LWLC00000000.1. This suggests that Saccharothrix sp. CB00851 may be a relatively simple organism in terms of genomic organization, potentially influencing its metabolic capabilities and ecological adaptations. The genus Saccharothrix is known for its role in soil ecosystems, particularly in the degradation of complex organic materials. This characteristic could imply that Saccharothrix sp. CB00851 may contribute to nutrient cycling and soil health by breaking down substances that are otherwise resistant to decomposition. Additionally, the presence of a single replicon might also suggest streamlined processes for replication and regulation, which can be advantageous in specific environmental conditions. This trait may allow Saccharothrix sp. CB00851 to efficiently adapt to various ecological niches, potentially enhancing its survival and functional role within microbial communities. In summary, Saccharothrix sp. CB00851, with its single replicon and complete genomic data, exemplifies the potential for specialized ecological functions in soil environments, particularly in organic matter decomposition and nutrient cycling. Understanding these traits can provide insights into the ecological roles of similar microorganisms in their natural habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusSaccharothrix
SpeciesSaccharothrix sp. CB00851
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Saccharothrix sp. CB00851 scaffold9, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

7936 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyl-phosphate glycerol 3-phosphate acyltransferaseA6A25_28170Not AvailableNegative3929321 - 393002225964.4
2-phospho-l-lactate guanylyltransferaseA6A25_28175Not AvailablePositive3930132 - 393074020515.7
hypothetical proteinA6A25_28180Not AvailableNegative3930763 - 393229555504.1
hypothetical proteinA6A25_28185Not AvailablePositive3932401 - 39326077170.43
rna degradosome polyphosphate kinaseA6A25_28190Not AvailablePositive3932685 - 393495584692.9
nudix hydrolaseA6A25_28195Not AvailablePositive3934981 - 393587432088.0
dna-binding proteinA6A25_28200Not AvailableNegative3936082 - 393676522649.3
3-isopropylmalate dehydratase small subunitA6A25_28205Not AvailableNegative3936975 - 393757722272.2
isopropylmalate isomeraseA6A25_28210Not AvailableNegative3937593 - 393899649992.5
iclr family transcriptional regulatorA6A25_28215Not AvailablePositive3939107 - 393976923041.7

Displaying genes 3461 – 3470 of 8001 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.