Nitrospira sp. SG-bin1

Kingdom

Pseudomonadati

Phylum

Nitrospirota

Class

Nitrospiria

Order

Nitrospirales

Family

Nitrospiraceae

Genus

Nitrospira

Description

Nitrospira sp. SG-bin1 is characterized by its single replicon structure, which is a notable trait among bacteria. This feature can influence the organism's genetic stability and replication efficiency. The genome of Nitrospira sp. SG-bin1 is cataloged under the accession number LVWS00000000.1, providing a reference point for researchers interested in exploring its genetic composition and functional capabilities. Nitrospira species are known for their role in the nitrogen cycle, particularly in the oxidation of nitrite to nitrate, which is a critical process in aquatic and terrestrial ecosystems. By understanding the genomic traits of Nitrospira sp. SG-bin1, researchers can gain insights into its metabolic pathways and ecological functions. The presence of a single replicon suggests a streamlined genetic organization, which might be advantageous in specific environmental conditions where resource allocation and rapid adaptation are essential. This trait can also indicate a potential for efficient energy use, aligning with the ecological role of Nitrospira as a nitrifying bacterium. In summary, the genomic information available for Nitrospira sp. SG-bin1, including its single replicon and accession details, supports its classification within the nitrifying bacteria group. This classification underscores its ecological significance, particularly in nitrogen cycling, which is vital for maintaining ecosystem health and promoting nutrient availability in various environments.

Taxonomy

KingdomPseudomonadati
PhylumNitrospirota
ClassNitrospiria
OrderNitrospirales
FamilyNitrospiraceae
GenusNitrospira
SpeciesNitrospira sp. SG-bin1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Nitrospira sp. SG-bin1 contig974, whole genome shotgun

Gene Summary

Adenine Count

967302 bp

Thymine Count

971788 bp

Guanine Count

1245924 bp

Cytosine Count

1229908 bp

Genome Length

4415371 bp

Protein-coding Genes

4154 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
imidazoleglycerol-phosphate dehydrataseA4E19_08370Not AvailablePositive3615685 - 361629322329.0
hypothetical proteinA4E19_08375Not AvailableNegative3616551 - 36168059803.56
imidazole glycerol phosphate synthase subunit hishA4E19_08380Not AvailablePositive3617142 - 361775022263.7
hypothetical proteinA4E19_08385Not AvailablePositive3617891 - 361849021513.7
1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomeraseA4E19_08390Not AvailablePositive3618492 - 361921725640.2
imidazole glycerol phosphate synthase subunit hisfA4E19_08395Not AvailablePositive3619285 - 362010629461.1
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphataseA4E19_08400Not AvailablePositive3620093 - 362073723885.5
histidine triad nucleotide-binding proteinA4E19_08405Not AvailablePositive3620748 - 362109212718.4
hypothetical proteinA4E19_08410Not AvailablePositive3621214 - 362304067324.2
rna polymerase subunit sigma-70A4E19_08415Not AvailablePositive3623043 - 362485768864.1

Displaying genes 3471 – 3480 of 4200 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.