Nitrospira sp. SG-bin1

Kingdom

Pseudomonadati

Phylum

Nitrospirota

Class

Nitrospiria

Order

Nitrospirales

Family

Nitrospiraceae

Genus

Nitrospira

Description

Nitrospira sp. SG-bin1 is characterized by its single replicon structure, which is a notable trait among bacteria. This feature can influence the organism's genetic stability and replication efficiency. The genome of Nitrospira sp. SG-bin1 is cataloged under the accession number LVWS00000000.1, providing a reference point for researchers interested in exploring its genetic composition and functional capabilities. Nitrospira species are known for their role in the nitrogen cycle, particularly in the oxidation of nitrite to nitrate, which is a critical process in aquatic and terrestrial ecosystems. By understanding the genomic traits of Nitrospira sp. SG-bin1, researchers can gain insights into its metabolic pathways and ecological functions. The presence of a single replicon suggests a streamlined genetic organization, which might be advantageous in specific environmental conditions where resource allocation and rapid adaptation are essential. This trait can also indicate a potential for efficient energy use, aligning with the ecological role of Nitrospira as a nitrifying bacterium. In summary, the genomic information available for Nitrospira sp. SG-bin1, including its single replicon and accession details, supports its classification within the nitrifying bacteria group. This classification underscores its ecological significance, particularly in nitrogen cycling, which is vital for maintaining ecosystem health and promoting nutrient availability in various environments.

Taxonomy

KingdomPseudomonadati
PhylumNitrospirota
ClassNitrospiria
OrderNitrospirales
FamilyNitrospiraceae
GenusNitrospira
SpeciesNitrospira sp. SG-bin1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Nitrospira sp. SG-bin1 contig974, whole genome shotgun

Gene Summary

Adenine Count

967302 bp

Thymine Count

971788 bp

Guanine Count

1245924 bp

Cytosine Count

1229908 bp

Genome Length

4415371 bp

Protein-coding Genes

4154 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinA4E19_03385Not AvailablePositive2373604 - 237393012530.1
hypothetical proteinA4E19_03390Not AvailablePositive2374253 - 237459713138.6
hypothetical proteinA4E19_03395Not AvailablePositive2374617 - 237500014407.2
hypothetical proteinA4E19_03400Not AvailablePositive2375169 - 23754179277.07
hypothetical proteinA4E19_03405Not AvailableNegative2375504 - 237610921198.7
hypothetical proteinA4E19_03410Not AvailableNegative2376140 - 237698829770.5
cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseA4E19_03415Not AvailableNegative2377077 - 237767321430.1
d-arabinose 5-phosphate isomeraseA4E19_03420Not AvailableNegative2377817 - 237878234025.6
3-deoxy-8-phosphooctulonate synthaseA4E19_03425Not AvailableNegative2378872 - 237969929730.1
ctp synthetaseA4E19_03430Not AvailableNegative2379799 - 238140059481.9

Displaying genes 2291 – 2300 of 4200 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.