Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Silicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Silicimonas |
| Species | Silicimonas algicola |
| Strain | DSM 103371 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | star/dumbbell/pleomorphic |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
756120 bp
Guanine Count
1425462 bp
Cytosine Count
1405196 bp
Genome Length
4337735 bp
Protein-coding Genes
4319 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate-tetrahydrofolate ligase | C8D95_1027 | Not Available | Positive | 897418 - 899085 | 59960.3 |
| universal stress protein family protein | C8D95_1028 | Not Available | Positive | 899141 - 899995 | 30246.5 |
| tripartite-type tricarboxylate transporter receptor subunit tctc | C8D95_1029 | Not Available | Positive | 900108 - 901079 | 34961.2 |
| tripartite tricarboxylate transporter tctb family protein | C8D95_10210 | Not Available | Positive | 901115 - 901618 | 18511.3 |
| putative tricarboxylic transport membrane protein | C8D95_10211 | Not Available | Positive | 901656 - 903167 | 52334.8 |
| ketopantoate reductase | C8D95_10212 | Not Available | Positive | 903363 - 904421 | 37755.7 |
| hypothetical protein | C8D95_10213 | Not Available | Negative | 904426 - 905829 | 52734.1 |
| serine hydroxymethyltransferase | C8D95_10214 | Not Available | Positive | 905989 - 907287 | 45920.7 |
| serine-glyoxylate aminotransferase | C8D95_10215 | Not Available | Positive | 907301 - 908494 | 42883.6 |
| glycerate dehydrogenase | C8D95_10216 | Not Available | Positive | 908491 - 909450 | 34902.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
