Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Silicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Silicimonas |
| Species | Silicimonas algicola |
| Strain | DSM 103371 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | star/dumbbell/pleomorphic |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
756120 bp
Guanine Count
1425462 bp
Cytosine Count
1405196 bp
Genome Length
4337735 bp
Protein-coding Genes
4319 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase yags fad-binding subunit | C8D95_101840 | Not Available | Negative | 825510 - 826484 | 34278.0 |
| xanthine dehydrogenase yagt iron-sulfur-binding subunit | C8D95_101841 | Not Available | Negative | 826481 - 826999 | 18682.1 |
| putative mfs family arabinose efflux permease | C8D95_101842 | Not Available | Negative | 827108 - 828421 | 46335.4 |
| Trna-cys | Not Available | Not Available | Positive | 828499 - 828572 | Not Available |
| tripartite atp-independent transporter dctm subunit | C8D95_101844 | Not Available | Negative | 828653 - 829948 | 45109.5 |
| c4-dicarboxylate transporter dctq subunit | C8D95_101845 | Not Available | Negative | 829945 - 830505 | 21235.6 |
| trap-type c4-dicarboxylate transport system substrate-binding protein | C8D95_101846 | Not Available | Negative | 830557 - 831552 | 36019.4 |
| gntr family transcriptional regulator | C8D95_101847 | Not Available | Negative | 831596 - 832249 | 24563.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | C8D95_101848 | Not Available | Negative | 832251 - 833105 | 29689.6 |
| hypothetical protein | C8D95_101849 | Not Available | Positive | 833294 - 834298 | 34511.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
