Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Silicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Silicimonas |
| Species | Silicimonas algicola |
| Strain | DSM 103371 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | star/dumbbell/pleomorphic |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
756120 bp
Guanine Count
1425462 bp
Cytosine Count
1405196 bp
Genome Length
4337735 bp
Protein-coding Genes
4319 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase rpoh-like sigma 32 subunit | C8D95_101730 | Not Available | Negative | 721773 - 722669 | 34093.6 |
| ribosomal large subunit pseudouridine synthase d | C8D95_101731 | Not Available | Negative | 722861 - 723808 | 33602.2 |
| hypothetical protein | C8D95_101732 | Not Available | Positive | 723855 - 724190 | 11818.3 |
| putative phosphodiesterase | C8D95_101733 | Not Available | Negative | 724187 - 724927 | 26794.8 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | C8D95_101734 | Not Available | Positive | 725016 - 725777 | 26260.8 |
| alkylation response protein aidb-like acyl-coa dehydrogenase | C8D95_101735 | Not Available | Positive | 725774 - 726934 | 42116.6 |
| hypothetical protein | C8D95_101736 | Not Available | Negative | 726931 - 727560 | 22035.5 |
| 8-oxo-dgtp pyrophosphatase mutt (nudix family) | C8D95_101737 | Not Available | Positive | 727691 - 728149 | 17046.3 |
| pit family inorganic phosphate transporter | C8D95_101738 | Not Available | Positive | 728220 - 729704 | 51456.9 |
| Trna-his | Not Available | Not Available | Positive | 729720 - 729796 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
