Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Silicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Silicimonas |
| Species | Silicimonas algicola |
| Strain | DSM 103371 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | star/dumbbell/pleomorphic |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
756120 bp
Guanine Count
1425462 bp
Cytosine Count
1405196 bp
Genome Length
4337735 bp
Protein-coding Genes
4319 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane associated rhomboid family serine protease | C8D95_101690 | Not Available | Negative | 681163 - 681831 | 23940.3 |
| hypothetical protein | C8D95_101691 | Not Available | Negative | 681836 - 683221 | 49635.5 |
| polysaccharide export outer membrane protein | C8D95_101692 | Not Available | Negative | 683230 - 683829 | 20928.3 |
| tetratricopeptide repeat protein | C8D95_101693 | Not Available | Negative | 683964 - 686396 | 88875.7 |
| lipopolysaccharide/colanic/teichoic acid biosynthesis glycosyltransferase | C8D95_101694 | Not Available | Negative | 686508 - 687065 | 20715.0 |
| type ii secretion system protein a | C8D95_101695 | Not Available | Positive | 687690 - 688544 | 31792.1 |
| uncharacterized protein involved in exopolysaccharide biosynthesis | C8D95_101696 | Not Available | Positive | 688541 - 690076 | 56370.0 |
| cobq/cobb/mind/para family nucleotide binding protein | C8D95_101697 | Not Available | Positive | 690094 - 690927 | 30792.8 |
| udp-glucose dehydrogenase | C8D95_101698 | Not Available | Negative | 690998 - 692320 | 47255.6 |
| udp-glucuronate 4-epimerase | C8D95_101699 | Not Available | Negative | 692349 - 693347 | 36948.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
