Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Silicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Silicimonas |
| Species | Silicimonas algicola |
| Strain | DSM 103371 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | star/dumbbell/pleomorphic |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
756120 bp
Guanine Count
1425462 bp
Cytosine Count
1405196 bp
Genome Length
4337735 bp
Protein-coding Genes
4319 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase family protein | C8D95_101440 | Not Available | Positive | 438012 - 438542 | 19044.8 |
| hypothetical protein | C8D95_101441 | Not Available | Positive | 438599 - 438739 | 5095.49 |
| glyceraldehyde-3-phosphate dehydrogenase (nad+) | C8D95_101442 | Not Available | Positive | 438759 - 439760 | 35945.9 |
| transglycosylase-like protein with slt domain | C8D95_101443 | Not Available | Positive | 439853 - 440443 | 21435.7 |
| 23s rrna um-2552 2'-o-methyltransferase | C8D95_101444 | Not Available | Positive | 440492 - 441193 | 25123.1 |
| l-alanine-dl-glutamate epimerase-like enolase superfamily enzyme | C8D95_101445 | Not Available | Negative | 441197 - 442393 | 43980.9 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | C8D95_101446 | Not Available | Positive | 442474 - 443265 | 28835.4 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | C8D95_101447 | Not Available | Positive | 443262 - 444080 | 28927.8 |
| arabinose-5-phosphate isomerase | C8D95_101448 | Not Available | Positive | 444077 - 445054 | 33570.7 |
| 3-deoxy-d-manno-octulosonic-acid transferase | C8D95_101449 | Not Available | Positive | 445059 - 446330 | 46055.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
