Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Silicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Silicimonas |
| Species | Silicimonas algicola |
| Strain | DSM 103371 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | star/dumbbell/pleomorphic |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
756120 bp
Guanine Count
1425462 bp
Cytosine Count
1405196 bp
Genome Length
4337735 bp
Protein-coding Genes
4319 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate (faa) hydrolase family protein | C8D95_111106 | Not Available | Negative | 3802699 - 3803838 | 40675.4 |
| regulator of rnase e activity rraa | C8D95_111107 | Not Available | Negative | 3803835 - 3804554 | 26314.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | C8D95_111108 | Not Available | Negative | 3804551 - 3805462 | 32073.4 |
| ectoine hydroxylase-related dioxygenase (phytanoyl-coa dioxygenase family) | C8D95_111109 | Not Available | Negative | 3805459 - 3806346 | 32925.5 |
| dihydroxy-acid dehydratase | C8D95_111110 | Not Available | Negative | 3806346 - 3808079 | 62976.0 |
| gntr family transcriptional regulator | C8D95_111111 | Not Available | Positive | 3808236 - 3808940 | 25520.8 |
| sugar phosphate isomerase/epimerase | C8D95_111112 | Not Available | Negative | 3808945 - 3809766 | 30074.8 |
| uncharacterized protein duf993 | C8D95_111113 | Not Available | Negative | 3809766 - 3810926 | 41277.0 |
| putative dehydrogenase | C8D95_111114 | Not Available | Negative | 3810930 - 3812081 | 42581.7 |
| carbohydrate abc transporter atp-binding protein (cut1 family) | C8D95_111115 | Not Available | Negative | 3812108 - 3813193 | 39948.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
