Silicimonas algicola str. DSM 103371

star/dumbbell/pleomorphicaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Silicimonas

Description

Silicimonas algicola strain DSM 103371 is a Gram-negative, non-motile bacterium characterized by its unique star or dumbbell shape and pleomorphic form. This microorganism is aerobic, requiring oxygen for growth and metabolic processes. It thrives optimally at a temperature of 25°C, placing it within the mesophilic temperature range, which is typical for many environmental bacteria. The genetic structure of Silicimonas algicola includes a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability in various environments. The strain is cataloged under the accession number QGGV00000000.1, which provides a reference for further genomic studies and comparisons with other microbial species. In terms of ecological significance, the characteristics of Silicimonas algicola suggest its potential role in aquatic ecosystems, particularly in environments where organic matter decomposition and nutrient cycling are essential. The aerobic nature of this bacterium may facilitate the breakdown of organic compounds in oxygen-rich environments, hence contributing to the overall health and balance of its ecological niche. Understanding the traits and behaviors of Silicimonas algicola could provide insights into the microbial dynamics in marine habitats and their influence on nutrient availability and environmental stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusSilicimonas
SpeciesSilicimonas algicola
StrainDSM 103371

Profile

Physiology
Gram staining propertiesGram-negative
Shapestar/dumbbell/pleomorphic
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Silicimonas algicola strain DSM 103371 Ga0215722_129, whole genome

Gene Summary

Adenine Count

750759 bp

Thymine Count

756120 bp

Guanine Count

1425462 bp

Cytosine Count

1405196 bp

Genome Length

4337735 bp

Protein-coding Genes

4319 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
maleylacetate reductaseC8D95_11116Not AvailablePositive3698596 - 369979841765.4
tripartite-type tricarboxylate transporter receptor subunit tctcC8D95_11117Not AvailablePositive3699904 - 370098338648.8
tcta family transporterC8D95_11118Not AvailablePositive3701051 - 370302169475.9
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)C8D95_11119Not AvailablePositive3703042 - 370396532321.5
acyl-coa synthetase (ndp forming)C8D95_11120Not AvailablePositive3703962 - 370606172304.7
acyl dehydrataseC8D95_11121Not AvailablePositive3706061 - 370692731299.8
2-methylcitrate dehydratase prpdC8D95_11122Not AvailablePositive3706920 - 370826946753.9
alkylation response protein aidb-like acyl-coa dehydrogenaseC8D95_11123Not AvailablePositive3708266 - 371052780091.2
hypothetical proteinC8D95_11124Not AvailableNegative3710524 - 371161838119.1
2-methylcitrate dehydratase prpdC8D95_11125Not AvailableNegative3711636 - 371303349976.4

Displaying genes 3741 – 3750 of 4372 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.