Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Silicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Silicimonas |
| Species | Silicimonas algicola |
| Strain | DSM 103371 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | star/dumbbell/pleomorphic |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
756120 bp
Guanine Count
1425462 bp
Cytosine Count
1405196 bp
Genome Length
4337735 bp
Protein-coding Genes
4319 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophanyl-trna synthetase | C8D95_101330 | Not Available | Negative | 337835 - 338860 | 37337.5 |
| membrane associated rhomboid family serine protease | C8D95_101331 | Not Available | Positive | 338949 - 339635 | 24767.5 |
| putative peptidoglycan lipid ii flippase | C8D95_101332 | Not Available | Negative | 339626 - 341179 | 54046.4 |
| utp--glnb (protein pii) uridylyltransferase glnd | C8D95_101333 | Not Available | Negative | 341220 - 344033 | 105607.0 |
| amino acid/amide abc transporter substrate-binding protein (haat family) | C8D95_101334 | Not Available | Negative | 343993 - 345168 | 39312.6 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | C8D95_101335 | Not Available | Positive | 345248 - 346108 | 30139.1 |
| putative endonuclease | C8D95_101336 | Not Available | Positive | 346144 - 346536 | 13782.4 |
| glutathione synthase | C8D95_101337 | Not Available | Positive | 346606 - 347544 | 34482.3 |
| acetyl esterase/lipase | C8D95_101338 | Not Available | Positive | 347653 - 348450 | 28431.9 |
| magnesium chelatase family protein | C8D95_101339 | Not Available | Negative | 348419 - 349930 | 52564.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
