Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Silicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Silicimonas |
| Species | Silicimonas algicola |
| Strain | DSM 103371 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | star/dumbbell/pleomorphic |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
756120 bp
Guanine Count
1425462 bp
Cytosine Count
1405196 bp
Genome Length
4337735 bp
Protein-coding Genes
4319 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose isomerase | C8D95_10839 | Not Available | Negative | 3178034 - 3179341 | 49083.5 |
| putative dehydrogenase | C8D95_10840 | Not Available | Negative | 3179374 - 3180549 | 42190.0 |
| sugar phosphate isomerase/epimerase | C8D95_10841 | Not Available | Negative | 3180560 - 3181615 | 39011.6 |
| c4-dicarboxylate transporter dctm subunit | C8D95_10842 | Not Available | Negative | 3181694 - 3183088 | 49090.6 |
| c4-dicarboxylate transporter dctq subunit | C8D95_10843 | Not Available | Negative | 3183090 - 3183770 | 25099.8 |
| c4-dicarboxylate-binding protein dctp | C8D95_10844 | Not Available | Negative | 3183849 - 3184850 | 36034.4 |
| two component fis family sigma54 specific transcriptional regulator | C8D95_10845 | Not Available | Negative | 3185066 - 3186286 | 43949.2 |
| two-component system c4-dicarboxylate transport sensor histidine kinase dctb | C8D95_10846 | Not Available | Negative | 3186283 - 3188028 | 62083.1 |
| Trna-phe | Not Available | Not Available | Positive | 3188093 - 3188167 | Not Available |
| hypothetical protein | C8D95_10848 | Not Available | Negative | 3188252 - 3188434 | 6676.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
