Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Silicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Silicimonas |
| Species | Silicimonas algicola |
| Strain | DSM 103371 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | star/dumbbell/pleomorphic |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
756120 bp
Guanine Count
1425462 bp
Cytosine Count
1405196 bp
Genome Length
4337735 bp
Protein-coding Genes
4319 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | C8D95_107112 | Not Available | Positive | 3051211 - 3052182 | 35063.1 |
| gntr family transcriptional regulator | C8D95_107113 | Not Available | Negative | 3052186 - 3052836 | 24604.6 |
| trap-type mannitol/chloroaromatic compound transport system substrate-binding protein | C8D95_107114 | Not Available | Positive | 3052999 - 3054018 | 36734.6 |
| trap-type mannitol/chloroaromatic compound transport system permease small subunit | C8D95_107115 | Not Available | Positive | 3054111 - 3054992 | 33263.8 |
| tripartite atp-independent transporter dctm subunit | C8D95_107116 | Not Available | Positive | 3054992 - 3056881 | 67317.8 |
| ectoine hydroxylase-related dioxygenase (phytanoyl-coa dioxygenase family) | C8D95_107117 | Not Available | Positive | 3056878 - 3057804 | 34346.8 |
| altronate hydrolase | C8D95_107118 | Not Available | Positive | 3058036 - 3059547 | 53540.6 |
| putative dehydrogenase | C8D95_107119 | Not Available | Positive | 3059585 - 3060610 | 35877.8 |
| glycine/d-amino acid oxidase-like deaminating enzyme | C8D95_107120 | Not Available | Positive | 3060607 - 3061704 | 39190.4 |
| 2-hydroxy-3-oxopropionate reductase | C8D95_107121 | Not Available | Positive | 3061701 - 3062579 | 30613.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
