Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Silicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Silicimonas |
| Species | Silicimonas algicola |
| Strain | DSM 103371 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | star/dumbbell/pleomorphic |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
756120 bp
Guanine Count
1425462 bp
Cytosine Count
1405196 bp
Genome Length
4337735 bp
Protein-coding Genes
4319 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine/d-amino acid oxidase-like deaminating enzyme | C8D95_107102 | Not Available | Positive | 3041048 - 3042313 | 45154.4 |
| trap-type c4-dicarboxylate transport system substrate-binding protein | C8D95_107103 | Not Available | Positive | 3042344 - 3043306 | 34489.2 |
| trap-type c4-dicarboxylate transport system permease small subunit | C8D95_107104 | Not Available | Positive | 3043434 - 3043955 | 18540.9 |
| tripartite atp-independent transporter dctm subunit | C8D95_107105 | Not Available | Positive | 3043952 - 3045265 | 47125.5 |
| hypothetical protein | C8D95_107106 | Not Available | Positive | 3045262 - 3046179 | 31332.9 |
| phosphomannomutase | C8D95_107107 | Not Available | Negative | 3046220 - 3047605 | 47943.9 |
| lactate dehydrogenase-like 2-hydroxyacid dehydrogenase | C8D95_107108 | Not Available | Negative | 3047613 - 3048569 | 33894.8 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathway | C8D95_107109 | Not Available | Negative | 3048562 - 3049407 | 30184.9 |
| 2-keto-3-deoxy-l-fuconate dehydrogenase | C8D95_107110 | Not Available | Negative | 3049452 - 3050195 | 25911.8 |
| glucose 1-dehydrogenase | C8D95_107111 | Not Available | Positive | 3050286 - 3051050 | 26721.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
